Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs4952155 chr2:30817831 T/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952158 chr2:30821999 C/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952159 chr2:30824028 G/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952161 chr2:30831808 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952162 chr2:30831887 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952163 chr2:30838395 G/A 1.64E-8 117 38.33 50.1 33.13 KM Plot
THYM rs4952164 chr2:30847014 G/A 1.54E-8 118 36.03 50.1 33.13 KM Plot
THYM rs4959229 chr6:3264288 A/T 0 116 4.13 42.73 38.58 KM Plot
THYM rs4959790 chr6:3265785 A/G 0 119 4.13 42.25 38.58 KM Plot
THYM rs4959791 chr6:3265875 C/T 0 119 4.13 42.25 38.58 KM Plot
THYM rs4959792 chr6:3266038 G/A 0 119 4.13 42.25 38.58 KM Plot
THYM rs4959793 chr6:3266143 G/A 0 119 4.13 42.25 38.58 KM Plot
THYM rs4998909 chr6:3266438 C/A 0 119 4.13 42.25 38.58 KM Plot
THYM rs4998910 chr6:3266449 G/T 0 119 4.13 42.25 38.58 KM Plot
THYM rs4998911 chr6:3266460 C/T 0 119 4.13 42.25 38.58 KM Plot